Package: genridge 0.8.0

genridge: Generalized Ridge Trace Plots for Ridge Regression

The genridge package introduces generalizations of the standard univariate ridge trace plot used in ridge regression and related methods. These graphical methods show both bias (actually, shrinkage) and precision, by plotting the covariance ellipsoids of the estimated coefficients, rather than just the estimates themselves. 2D and 3D plotting methods are provided, both in the space of the predictor variables and in the transformed space of the PCA/SVD of the predictors.

Authors:Michael Friendly [aut, cre]

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genridge.pdf |genridge.html✨
genridge/json (API)
NEWS

# Install 'genridge' in R:

install.packages('genridge', repos = c('https://friendly.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/friendly/genridge/issues

Pkgdown site:https://friendly.github.io

Datasets:

Acetylene - Acetylene Data
Detroit - Detroit Homicide Data for 1961-1973
Manpower - Hospital manpower data
diab - Diabetes Progression
prostate - Prostate Cancer Data

On CRAN:

bias-variance graphics principal-component-analysis regression-models ridge-regression singular-value-decomposition

4.84 score 4 stars 69 scripts 395 downloads 7 exports 86 dependencies

Last updated 3 months agofrom:71fbe2ee8d. Checks:5 OK, 3 NOTE. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Jan 31 2025
R-4.5-win	NOTE	Jan 31 2025
R-4.5-mac	NOTE	Jan 31 2025
R-4.5-linux	NOTE	Jan 31 2025
R-4.4-win	OK	Jan 31 2025
R-4.4-mac	OK	Jan 31 2025
R-4.3-win	OK	Jan 31 2025
R-4.3-mac	OK	Jan 31 2025

Exports:contourf pca plot3d precision ridge traceplot trans.colors

Dependencies:abind backports base64enc boot broom bslib cachem car carData cli colorspace cowplot cpp11 Deriv digest doBy dplyr evaluate fansi farver fastmap fontawesome Formula fs generics ggplot2 glue gtable highr htmltools htmlwidgets isoband jquerylib jsonlite knitr labeling lattice lifecycle lme4 magrittr MASS Matrix MatrixModels memoise mgcv microbenchmark mime minqa modelr munsell nlme nloptr nnet numDeriv pbkrtest pillar pkgconfig purrr quantreg R6 rappdirs rbibutils RColorBrewer Rcpp RcppEigen Rdpack reformulas rgl rlang rmarkdown sass scales SparseM stringi stringr survival tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun yaml

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Generalized ridge trace plots for ridge regression	genridge-package genridge _PACKAGE
Acetylene Data	Acetylene
Biplot of Ridge Regression Trace Plot in SVD Space	biplot.pcaridge biplot.ridge
Enhanced Contour Plots	contourf
Detroit Homicide Data for 1961-1973	Detroit
Diabetes Progression	diab
Hospital manpower data	Manpower
Scatterplot Matrix of Bivariate Ridge Trace Plots	pairs.ridge
Transform Ridge Estimates to PCA Space	pca pca.ridge
Plot Shrinkage vs. Variance for Ridge Precision	plot.precision
Bivariate Ridge Trace Plots	plot.pcaridge plot.ridge
3D Ridge Trace Plots	plot3d plot3d.pcaridge plot3d.ridge
Measures of Precision and Shrinkage for Ridge Regression	precision precision.lm precision.ridge
Prostate Cancer Data	prostate
Ridge Regression Estimates	best best.ridge coef.ridge print.ridge ridge ridge.default ridge.formula vcov.ridge
Univariate Ridge Trace Plots	traceplot
Make Colors Transparent	trans.colors
Variance Inflation Factors for Ridge Regression	plot.vif.ridge print.vif.ridge vif.ridge